Browse Proteins

Explore nucleic acid-binding proteins and their associated structural information.

43 proteins
Advanced filters
Clear
Showing 12 of 43 matching proteins
Reviewed
Viral replication / viral nucleic-acid-related protein
Organism
Hepatitis C virus genotype 1b (strain HC-J4)
UniProt ID
O92972
Related PDBs
1nb6,4ry5
InterPro family
IPR002166: RNA dependent RNA polymerase, hepatitis C virus
InterPro domains
IPR000745: Hepatitis C virus, Non-structural protein NS4a; IPR001490: Hepatitis C virus, Non-structural protein NS4b; IPR001650: Helicase, C-terminal domain-like; IPR002518: Hepatitis C virus, Non-structural protein NS2; IPR002519: Hepatitis C virus, Envelope glycoprotein E1; IPR002521: Hepatitis C virus, Core protein, C-terminal; IPR002522: Hepatitis C virus, Core protein, N-terminal; IPR002531: Hepatitis C virus, Non-structural protein E2/NS1; IPR002868: Hepatitis C virus, Non-structural 5a protein; IPR004109: Hepatitis C virus, NS3 protease; IPR007094: RNA-directed RNA polymerase, catalytic domain; IPR011492: Non-structural protein NS3-like, DEAD-box helicase, flavivirus; IPR013192: Hepatitis C virus, Non-structural 5a protein, domain 1a; IPR013193: Hepatitis C virus non-structural 5a, 1B domain; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR024350: Hepatitus C virus, Non-structural 5a protein, C-terminal; IPR049913: Hepatitis C virus, p7 channel; IPR054175: NS3 RNA helicase, C-terminal helical domain
Matched classes
CRISPR-Cas / prokaryotic antiviral defense protein [cas ] || Viral replication / viral nucleic-acid-related protein [hepatitis c] || DNA/RNA polymerase and replication protein [polymerase, rna polymerase] || DNA/RNA modification or nucleotide metabolism enzyme [nucleoside] || Other enzyme / miscellaneous [peptidase]
View protein
Reviewed
RNA-binding / RNA metabolism protein
Organism
Homo sapiens
UniProt ID
P09651
Related PDBs
9f4g,9f4h,9f4n,9f4s,9f4u,9f4k,9f4o,9f50,9f4j,9f4q,9f4p,9f4w,9f53,9f5f,9f5e,9f4z,9f5d,9f4d,9f4x,9f4y,9hql,9hq9
InterPro family
—
InterPro domains
IPR000504: RNA recognition motif domain; IPR021662: Heterogeneous nuclear ribonucleoprotein A1/A2, C-terminal; IPR034516: hnRNP A1/3, RNA recognition motif 2; IPR034845: hnRNP A1, RNA recognition motif 1
Matched classes
RNA-binding / RNA metabolism protein [rna-binding] || DNA/RNA modification or nucleotide metabolism enzyme [nucleotide]
View protein
Reviewed
Other enzyme / miscellaneous
Organism
Homo sapiens
UniProt ID
P01857
Related PDBs
5k64
InterPro family
IPR050380: Immune Recognition and Response Modulators
InterPro domains
IPR003597: Immunoglobulin C1-set; IPR007110: Immunoglobulin-like domain
Matched classes
Other enzyme / miscellaneous [immune recognition]
View protein
Reviewed
Translation / ribosomal protein
Organism
Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
UniProt ID
P60493
Related PDBs
1v8q
InterPro family
IPR001684: Large ribosomal subunit protein bL27
InterPro domains
—
Matched classes
Translation / ribosomal protein [ribosomal]
View protein
Reviewed
RNA-binding / RNA metabolism protein
Organism
Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)
UniProt ID
C4M1P9
Related PDBs
4peg
InterPro family
—
InterPro domains
IPR004843: Calcineurin-like, phosphoesterase domain; IPR041816: Lariat debranching enzyme, N-terminal metallophosphatase domain; IPR049499: Dbr1, C-terminal domain
Matched classes
RNA-binding / RNA metabolism protein
View protein
Reviewed
Other enzyme / miscellaneous
Organism
Gallus gallus
UniProt ID
P00698
Related PDBs
4n0j,4prq,4pru,8aj3,8aj4
InterPro family
IPR000974: Glycoside hydrolase, family 22, lysozyme; IPR001916: Glycoside hydrolase, family 22
InterPro domains
IPR019799: Glycoside hydrolase family 22 domain
Matched classes
Other enzyme / miscellaneous [glycoside hydrolase, lysozyme]
View protein
Reviewed
RNA-binding / RNA metabolism protein
Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843)
UniProt ID
P08965
Related PDBs
7dus
InterPro family
—
InterPro domains
IPR000504: RNA recognition motif domain; IPR007201: Mei2-like, C-terminal RNA recognition motif; IPR034862: Fungal Mei2-like, RNA recognition motif 3; IPR034863: Fungal Mei2-like, RNA recognition motif 2
Matched classes
RNA-binding / RNA metabolism protein [rna-binding] || DNA/RNA modification or nucleotide metabolism enzyme [nucleotide]
View protein
Reviewed
Viral replication / viral nucleic-acid-related protein
Organism
Vesicular stomatitis Indiana virus (strain 98COE North America)
UniProt ID
Q77E03
Related PDBs
3hhw
InterPro family
—
InterPro domains
IPR000448: Rhabdovirus nucleocapsid
Matched classes
Viral replication / viral nucleic-acid-related protein
View protein
Reviewed
DNA/RNA polymerase and replication protein
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID
P29468
Related PDBs
1fa0
InterPro family
IPR014492: Poly(A) polymerase
InterPro domains
IPR007010: Poly(A) polymerase, RNA-binding domain; IPR007012: Poly(A) polymerase, central domain; IPR048840: Poly(A) polymerase, nucleotidyltransferase domain
Matched classes
DNA/RNA polymerase and replication protein [nucleotidyltransferase, poly(a) polymerase, polymerase] || RNA-binding / RNA metabolism protein [rna-binding]
View protein
Reviewed
DNA/RNA polymerase and replication protein
Organism
Vaccinia virus (strain Western Reserve)
UniProt ID
P23371
Related PDBs
2ga9
InterPro family
IPR004976: Poly(A) polymerase catalytic subunit, Poxvirus
InterPro domains
IPR024231: Poly(A) polymerase, nucleotidyltransferase domain, Poxvirus; IPR024397: Poxvirus poly(A) polymerase, catalytic subunit, C-terminal; IPR024398: Poxvirus poly(A) polymerase, catalytic subunit, N-terminal
Matched classes
Viral replication / viral nucleic-acid-related protein [poxvirus] || DNA/RNA polymerase and replication protein [nucleotidyltransferase, poly(a) polymerase, polymerase]
View protein
Reviewed
Argonaute / RNAi-related protein
Organism
Homo sapiens
UniProt ID
Q9UKV8
Related PDBs
3lud,3luj,3qx8,3qx9,7d7u,9bf0
InterPro family
IPR028602: Protein argonaute-2
InterPro domains
IPR003100: PAZ domain; IPR003165: Piwi domain; IPR014811: Argonaute, linker 1 domain; IPR032472: Argonaute linker 2 domain; IPR032473: Protein argonaute, Mid domain; IPR032474: Protein argonaute, N-terminal; IPR045246: Argonaute-like, PIWI domain
Matched classes
Argonaute / RNAi-related protein [argonaute, piwi] || Nuclease / DNA-RNA repair enzyme [nuclease, ribonuclease]
View protein
Reviewed
Other enzyme / miscellaneous
Organism
Homo sapiens
UniProt ID
P00734
Related PDBs
2h9t,2gp9,3bf6,3dd2,3u8r,3u69,4rko,5e8e
InterPro family
IPR001314: Peptidase S1A, chymotrypsin family; IPR003966: Prothrombin/thrombin; IPR051659: Serine Protease S1 Domain-Containing Protein
InterPro domains
IPR000001: Kringle; IPR000294: Gamma-carboxyglutamic acid-rich (GLA) domain; IPR001254: Serine proteases, trypsin domain; IPR018992: Thrombin light chain
Matched classes
Other enzyme / miscellaneous [chymotrypsin, peptidase, prothrombin, serine protease, thrombin]
View protein