Browse Proteins

Explore nucleic acid-binding proteins and their associated structural information.

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Showing 7 of 43 matching proteins
Reviewed
Translation / ribosomal protein
Organism
Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
UniProt ID
Q980A5
Related PDBs
2pmd,3i1f,3pen,3sjz,4m53,4rd4,4rcz,4rd2
InterPro family
IPR022424: Translation initiation factor 2, gamma subunit; IPR050543: Eukaryotic Initiation Factor 2 Gamma Subunit
InterPro domains
IPR000795: Translational (tr)-type GTP-binding domain; IPR005225: Small GTP-binding domain; IPR015256: Initiation factor eIF2 gamma, C-terminal; IPR044127: Initiation factor eIF2 gamma, domain 2; IPR044128: Initiation factor eIF2 gamma, GTP-binding domain
Matched classes
Translation / ribosomal protein [ef1a, eif2, elongation factor, initiation factor, translation elongation, translation initiation] || DNA/RNA modification or nucleotide metabolism enzyme [nucleoside]
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Reviewed
tRNA-related enzyme
Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
UniProt ID
P43912
Related PDBs
4yq4,4yq5,4ypy
InterPro family
IPR002649: tRNA (guanine-N1-)-methyltransferase TrmD
InterPro domains
IPR016009: tRNA methyltransferase TRMD/TRM10-type domain
Matched classes
tRNA-related enzyme [trmd, trna, trna methyltransferase] || DNA/RNA modification or nucleotide metabolism enzyme [methyltransferase]
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Reviewed
tRNA-related enzyme
Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
UniProt ID
O58843
Related PDBs
1it7,1it8
InterPro family
IPR004803: tRNA-guanine transglycosylase; IPR004804: tRNA-guanine(15) transglycosylase
InterPro domains
IPR002478: PUA domain; IPR002616: tRNA-guanine(15) transglycosylase-like; IPR004521: Uncharacterised domain CHP00451; IPR029402: tRNA-guanine transglycosylase, patch-forming domain C2; IPR032729: tRNA-guanine(15) transglycosylase, C1 domain
Matched classes
Nuclease / DNA-RNA repair enzyme [glycosylase] || tRNA-related enzyme [transglycosylase, trna, trna-guanine]
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Reviewed
tRNA-related enzyme
Organism
Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
UniProt ID
O28025
Related PDBs
3au7,4rvz,6agg
InterPro family
IPR024913: tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS; IPR053434: tRNA(Ile2) 2-agmatinylcytidine synthetase
InterPro domains
IPR004365: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type; IPR013696: TiaS, FLD domain; IPR053870: TiaS-like, TCKD domain; IPR055394: TiaS, C-terminal zinc ribbon domain
Matched classes
tRNA-related enzyme [agmatinylcytidine, tias, trna]
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Reviewed
RNA-binding / RNA metabolism protein
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID
Q06078
Related PDBs
4nsx
InterPro family
—
InterPro domains
IPR007319: WDR36/Utp21, C-terminal domain; IPR059156: WDR36/Utp21, second beta-propeller domain; IPR059157: WDR36/Utp21, N-terminal domain
Matched classes
RNA-binding / RNA metabolism protein
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Unreviewed
Other enzyme / miscellaneous
Organism
Segatella buccae ATCC 33574
UniProt ID
E6K398
Related PDBs
6dtd
InterPro family
—
InterPro domains
—
Matched classes
Other enzyme / miscellaneous
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Reviewed
DNA/RNA modification or nucleotide metabolism enzyme
Organism
Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
UniProt ID
Q97R12
Related PDBs
5xj1
InterPro family
IPR010280: (Uracil-5)-methyltransferase family
InterPro domains
IPR002792: TRAM domain
Matched classes
DNA/RNA modification or nucleotide metabolism enzyme [methyltransferase]
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